Cran siggenes
WebNov 8, 2024 · an object of class SAM. a numeric value specifying the value of Delta for which the SAM plot should be generated. an integer between 0 and 2. If pos.stats = 1, general information as the number of significant genes and the estimated FDR for the specified value of delta will be plotted in the upper left corner of the plot. WebNov 8, 2024 · get.siggenes: Extract significant genes for sets of variables in time... i.rank: Ranks a vector to index; ISOdata: RNA-Seq dataset example for isoforms; ISOdesign: Experimental design for ISOdata dataset example; IsoModel: Detection of genes with Isoforms with different gene... IsoPlot: Plotting the isoform profiles of a specific gene …
Cran siggenes
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WebMar 15, 2024 · CRAN is a network of ftp and web servers around the world that store identical, up-to-date, versions of code and documentation for R. Please use the CRAN … Web8 in 10 consumers say they entered a store or business they had never visited before based simply on its signs.. 3 out of 4 tell others about a business simply based on its signage.. …
WebNov 8, 2024 · In siggenes: Multiple Testing using SAM and Efron's Empirical Bayes Approaches. Description Usage Arguments Details Value Author(s) References See Also … WebMay 1, 2024 · runSAM: Run the sam webapp SAM: Significance analysis of microarrays - simple user interface samr: Significance analysis of microarrays samr.assess.samplesize: Assess the sample size for a SAM analysis samr.assess.samplesize.plot: Make a plot of the results from samr.assess.samplesize samr.compute.delta.table: Compute delta table for …
WebIdentification of differentially expressed genes and estimation of the False Discovery Rate (FDR) using both the Significance Analysis of Microarrays (SAM) and the Empirical Bayes Analyses of Microarrays (EBAM). Web6 getNet Details The function getExampleData(ExampleData = "SigLncs") obtains a vector of lncRNAs confirmed to be related with breast cancer. The function getExampleData(ExampleData = "Profile") obtains
WebFunctions for kernel smoothing (and density estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995) "Kernel Smoothing".
WebThe canonical way to perform meta-analysis involves using effect sizes. When they are not available this package provides a number of methods for meta-analysis of significance values including the methods of Edgington, Fisher, Lancaster, Stouffer, Tippett, and Wilkinson; a number of data-sets to replicate published results; and routines for graphical … drum cajon setupWebDOI: 10.18129/B9.bioc.siggenes Multiple Testing using SAM and Efron's Empirical Bayes Approaches. Bioconductor version: Release (3.16) Identification of differentially … drum bug music salem oregonWebThe Crans family name was found in the USA, the UK, Canada, and Scotland between 1840 and 1920. The most Crans families were found in USA in 1920. In 1840 there were 8 … drumclog 4x4WebCRAN - Package shiny Makes it incredibly easy to build interactive web applications with R. Automatic "reactive" binding between inputs and outputs and extensive prebuilt widgets make it possible to build beautiful, responsive, and powerful applications with minimal effort. shiny: Web Application Framework for R drumclog avenue milngavieWebMay 7, 2024 · Warning: replacing previous import ‘igraph::groups’ by ‘xcms::groups’ when loading ‘MetaboAnalystR’. DONE (MetaboAnalystR) preparing 'MetaboAnalystR': (846ms) √ checking DESCRIPTION meta-information ... checking for LF line-endings in source and make files and shell scripts (790ms) checking for empty or unneeded directories. drum cake boardWebMar 26, 2024 · Performs a Significance Analysis of Microarrays (SAM). It is possible to perform one and two class analyses using either a modified t-statistic or a (standardized) Wilcoxon rank statistic, and a multiclass analysis using a modified F-statistic. Moreover, this function provides a SAM procedure for categorical data such as SNP data and the … drum cake boards ukWebJun 1, 2024 · After spending at least 30 minutes installing dependencies from CRAN and Bioconductor, I was able to get the code to work. ... pls, caret, lattice, igraph, gplots, KEGGgraph, reshape, RColorBrewer, tibble, siggenes, plotly, xcms, CAMERA, fgsea, MSnbase) For whatever reason, I had to install the following packages manually as well: ... drum cake topper amazon